- Introduction
- Welcome to Software Carpentry!
- Introduction to R
- The basics of working in R!
- Functions
- An introduction to abstracting your workflows with functions. We will also cover some basics of R at the same time.
- Projects
- Organise your files into a project and start thinking about workflows.
- Repeating things
- Avoid repeating yourself and have the computer do the boring bits.
- Testing
- An introduction to unit testing; making sure your functions do the right thing, and thinking about what the right thing might be.
- Principles of software carpentry
- Putting it all together while wrangling some data into order.
- The Unix shell
- Basic introduction to the Unix shell.
- Version control with git
- Time travel and other tricks.
- Reproducible research with knitr
- Make pretty reports that other people can reproduce.
- Wrap-up
- Etherpad.txt
- Classroom notes from day the bootcamp